Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter mate | IM33_18265 | Not Available | - | 3879769 - 3881148 | 50662.5 |
| abc transporter permease | IM33_18270 | Not Available | - | 3881433 - 3882224 | 30492.8 |
| abc transporter permease | IM33_18275 | Not Available | - | 3882224 - 3883078 | 33221.9 |
| multidrug abc transporter atp-binding protein | IM33_18280 | P50332 | - | 3883065 - 3884060 | 38331.3 |
| diguanylate cyclase | IM33_18285 | Q8X6V3 | + | 3884762 - 3885718 | 37633.5 |
| hypothetical protein | IM33_18290 | P42247 | - | 3885931 - 3886626 | 25818.9 |
| hypothetical protein | IM33_18295 | P42246 | - | 3886619 - 3887350 | 26978.9 |
| hypothetical protein | IM33_18300 | Not Available | - | 3887756 - 3888304 | 20492.2 |
| hypothetical protein | IM33_18305 | Not Available | - | 3888824 - 3889522 | 27795.4 |
| ribosome biogenesis gtpase rsga | IM33_18310 | Q8YK41 | - | 3890055 - 3891122 | 39775.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.