Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase | IM33_01545 | P54420 | + | 283083 - 284666 | 62197.0 |
| radical sam protein | IM33_01550 | Not Available | - | 284731 - 285327 | 22825.3 |
| membrane protein | IM33_01555 | Not Available | - | 285354 - 285881 | 18750.7 |
| lactate dehydrogenase | IM33_01560 | Q88VJ2 | - | 286236 - 287234 | 36434.8 |
| carnitine dehydratase | IM33_01565 | Q93AM1 | + | 287911 - 289110 | 44208.9 |
| 2-hydroxyglutaryl-coa dehydratase | IM33_01570 | Q5U925 | + | 289149 - 289949 | 28502.3 |
| 2-hydroxyglutaryl-coa dehydratase | IM33_01575 | Q5U924 | + | 289964 - 291190 | 46324.5 |
| phenyllactate dehydratase | IM33_01580 | Q5U923 | + | 291190 - 292317 | 42366.2 |
| acyl-coa dehydrogenase | IM33_01585 | J7TF92 | + | 292365 - 293498 | 40910.1 |
| electron transfer flavoprotein subunit beta | IM33_01590 | H6LGM7 | + | 293531 - 294316 | 28685.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.