Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| clp protease | IM33_18215 | C4ZGF4 | - | 3870048 - 3870632 | 21335.7 |
| arac family transcriptional regulator | IM33_18220 | P43463 | - | 3870629 - 3871111 | 19090.7 |
| gntr family transcriptional regulator | IM33_18225 | P96669 | - | 3871294 - 3872709 | 54442.2 |
| hypothetical protein | IM33_18230 | Not Available | + | 3872824 - 3873492 | 25450.1 |
| nitroreductase | IM33_18235 | Not Available | - | 3873675 - 3874193 | 19705.8 |
| transcriptional regulator | IM33_18240 | P42406 | + | 3874345 - 3874668 | 12241.3 |
| protease | IM33_18245 | Q54MG7 | - | 3874673 - 3875257 | 21827.4 |
| asnc family transcriptional regulator | IM33_18250 | Not Available | - | 3875330 - 3875596 | 10112.2 |
| abc transporter atp-binding protein | IM33_18255 | O34512 | + | 3876794 - 3878332 | 58048.9 |
| transcriptional regulator | IM33_18260 | Not Available | - | 3878605 - 3879318 | 27224.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.