Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase | IM33_18165 | Not Available | - | 3858719 - 3860398 | 62658.6 |
| spermidine/putrescine abc transporter substrate-binding protein | IM33_18170 | P07658 | - | 3860447 - 3860863 | 15542.8 |
| abc transporter permease | IM33_18175 | Not Available | - | 3861115 - 3862173 | 40475.8 |
| multidrug abc transporter | IM33_18180 | P33112 | - | 3862385 - 3863044 | 25222.7 |
| hypothetical protein | IM33_18185 | Not Available | + | 3863350 - 3863979 | 24186.7 |
| hypothetical protein | IM33_18190 | Not Available | - | 3864173 - 3864748 | 22121.6 |
| histidine kinase | IM33_18195 | Not Available | - | 3865044 - 3865319 | 11010.2 |
| (fe-s)-binding protein | IM33_18200 | Not Available | - | 3865634 - 3866395 | 28498.3 |
| spore surface glycoprotein bclb | IM33_18205 | Not Available | - | 3866540 - 3868585 | 60171.4 |
| glycosyl transferase | IM33_18210 | P42460 | - | 3868661 - 3869740 | 42379.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.