Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoesterase | IM33_18110 | Q58040 | - | 3847948 - 3848418 | 17618.3 |
| ribonuclease ph | IM33_18115 | B2UZ31 | - | 3848418 - 3849767 | 50227.5 |
| nad-dependent dna ligase liga | IM33_18120 | Q180F3 | - | 3849927 - 3851951 | 76328.3 |
| dihydrofolate reductase | IM33_18125 | Q9UBQ7 | - | 3852139 - 3853077 | 35817.8 |
| hypothetical protein | IM33_18130 | Not Available | - | 3853178 - 3853600 | 15966.2 |
| transporter | IM33_18135 | Not Available | + | 3853789 - 3855072 | 46614.4 |
| electron transporter hydn | IM33_18140 | P0AAK6 | - | 3855149 - 3855664 | 18797.0 |
| iron hydrogenase | IM33_18145 | Q46508 | - | 3855664 - 3857040 | 50855.1 |
| oxidoreductase | IM33_18150 | Not Available | - | 3857065 - 3857616 | 20228.8 |
| sugar abc transporter substrate-binding protein | IM33_18160 | A8FIA1 | - | 3857837 - 3858670 | 31788.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.