Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_18060 | Not Available | - | 3835853 - 3836533 | 25684.3 |
| atp-binding protein | IM33_18065 | Not Available | - | 3836926 - 3838005 | 41256.9 |
| transporter | IM33_18070 | Q180E3 | + | 3838585 - 3839955 | 49256.7 |
| gtp-binding protein engb | IM33_18075 | Q180E5 | - | 3840223 - 3840834 | 23360.1 |
| dna-binding protein | IM33_18080 | Q180E4 | - | 3840824 - 3843187 | 89177.1 |
| chromate transporter | IM33_18085 | Not Available | + | 3843367 - 3843879 | 18580.6 |
| chromate transporter | IM33_18090 | Q55027 | + | 3843867 - 3844394 | 19055.9 |
| atp-dependent protease | IM33_18095 | Q180E8 | - | 3844465 - 3845715 | 46473.2 |
| clp protease | IM33_18100 | A0Q2L1 | - | 3845734 - 3846318 | 21329.9 |
| trigger factor | IM33_18105 | Q180E9 | - | 3846468 - 3847754 | 48233.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.