Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_18010 | Q05627 | - | 3827173 - 3828777 | 59413.4 |
| hypothetical protein | IM33_18015 | Not Available | - | 3828825 - 3829142 | 12339.0 |
| hypothetical protein | IM33_18020 | Not Available | - | 3829147 - 3829512 | 13753.5 |
| protein translocase | IM33_18025 | Not Available | - | 3829593 - 3830630 | 40221.2 |
| hypothetical protein | IM33_18030 | Not Available | - | 3830883 - 3831467 | 22968.8 |
| hypothetical protein | IM33_18035 | Not Available | - | 3831482 - 3831925 | 17476.9 |
| pilus assembly protein pilm | IM33_18040 | Not Available | - | 3831926 - 3832798 | 34176.9 |
| type iv pilin | IM33_18045 | Not Available | - | 3832852 - 3833202 | 12515.2 |
| type ii secretion system protein f | IM33_18050 | Q5SK58 | - | 3833256 - 3834341 | 40918.1 |
| general secretion pathway protein gspe | IM33_18055 | Q5SLC9 | - | 3834481 - 3835860 | 51800.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.