Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts mannose transporter subunit iicd | IM33_17955 | P69803 | - | 3812626 - 3813417 | 27641.9 |
| pts mannose transporter subunit iia | IM33_17960 | Not Available | - | 3813457 - 3813879 | 15577.1 |
| pts mannose transporter subunit iia | IM33_17965 | P69799 | - | 3813895 - 3814374 | 17600.4 |
| transcriptional antiterminator | IM33_17970 | D0ZLR9 | - | 3814495 - 3817245 | 104527.0 |
| pyrroline-5-carboxylate reductase | IM33_17975 | P0A9L8 | - | 3817840 - 3818643 | 28117.3 |
| formate acetyltransferase | IM33_17980 | A0A031WDE4 | - | 3818949 - 3821318 | 89159.3 |
| ferredoxin | IM33_17985 | A0A069AMK2 | - | 3821323 - 3822231 | 34354.5 |
| protease | IM33_17995 | P45129 | - | 3822576 - 3823655 | 37335.6 |
| glucose-6-phosphate isomerase | IM33_18000 | Q180C9 | - | 3823809 - 3825158 | 50528.0 |
| sodium-dependent phosphate transporter | IM33_18005 | P40730 | - | 3825421 - 3827049 | 58990.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.