Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integrase | IM33_17885 | Not Available | + | 3801009 - 3801134 | 4839.94 |
| xre family transcriptional regulator | IM33_17890 | Q06239 | - | 3801250 - 3801930 | 26316.8 |
| phosphate abc transporter substrate-binding protein | IM33_17910 | P46338 | - | 3803765 - 3804598 | 29279.6 |
| oligopeptidase pepb | IM33_17915 | O31605 | - | 3804856 - 3806640 | 68739.0 |
| cation transporter | IM33_17920 | P0AFV3 | - | 3806706 - 3807371 | 24695.7 |
| heptaprenyl diphosphate synthase | IM33_17930 | Not Available | - | 3807761 - 3808270 | 18476.0 |
| iron transporter feoa | IM33_17935 | Not Available | + | 3808477 - 3808695 | 7960.9 |
| iron transporter feob | IM33_17940 | Q6GDP8 | + | 3808713 - 3810653 | 70632.3 |
| phosphosugar isomerase | IM33_17945 | Not Available | - | 3810729 - 3811784 | 39881.2 |
| pts mannose transporter subunit iid | IM33_17950 | P69805 | - | 3811833 - 3812633 | 29433.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.