Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| proline reductase | IM33_17710 | Q9Z4Q7 | - | 3764324 - 3764569 | 8696.74 |
| proline reductase | IM33_17715 | Not Available | - | 3764597 - 3765049 | 15990.2 |
| hypothetical protein | IM33_17720 | Not Available | - | 3765087 - 3765371 | 10946.2 |
| proline reductase | IM33_17725 | Not Available | - | 3765452 - 3767332 | 67707.2 |
| diguanylate cyclase | IM33_17730 | P26047 | - | 3767761 - 3769521 | 67087.6 |
| cell surface protein | IM33_17735 | Not Available | - | 3769923 - 3771799 | 68914.8 |
| electron transporter rnfc | IM33_17750 | D8GR66 | - | 3773174 - 3774487 | 46820.5 |
| polysaccharide deacetylase | IM33_17755 | P50850 | - | 3774876 - 3775640 | 29058.0 |
| spore protein | IM33_17760 | P22066 | + | 3775931 - 3776134 | 7392.9 |
| hypothetical protein | IM33_17765 | Not Available | + | 3776325 - 3776861 | 20952.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.