Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integrase | IM33_17465 | Not Available | + | 3708747 - 3709919 | 45916.7 |
| hypothetical protein | IM33_17470 | Not Available | - | 3710543 - 3713134 | 99540.7 |
| hypothetical protein | IM33_17480 | Not Available | - | 3713859 - 3714779 | 35570.9 |
| Tmrna,resume consensus sequence (at 87): aataaacgcagacgataa | Not Available | Not Available | + | 3715369 - 3715718 | Not Available |
| single-stranded dna-binding protein | IM33_17485 | Q184Z6 | - | 3715876 - 3716331 | 17336.3 |
| transcriptional regulator | IM33_17490 | Not Available | + | 3716727 - 3717554 | 29998.0 |
| abc transporter permease | IM33_17505 | Not Available | - | 3719307 - 3719951 | 23843.6 |
| abc transporter permease | IM33_17510 | Not Available | - | 3719881 - 3721170 | 49125.4 |
| abc transporter atp-binding protein | IM33_17515 | P94374 | - | 3721167 - 3722039 | 31994.3 |
| hypothetical protein | IM33_17520 | Not Available | - | 3722768 - 3723259 | 18710.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.