Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_17320 | Not Available | - | 3673478 - 3675265 | 68518.0 |
| xre family transcriptional regulator | IM33_17325 | Not Available | - | 3676632 - 3676844 | 8216.17 |
| membrane protein | IM33_17330 | Not Available | - | 3676845 - 3677261 | 15556.4 |
| membrane protein | IM33_17335 | Not Available | - | 3677329 - 3677742 | 15810.9 |
| glutamine amidotransferase | IM33_17345 | O34947 | - | 3678574 - 3679203 | 23695.8 |
| deor faimly transcriptional regulator | IM33_17350 | Not Available | - | 3679282 - 3680244 | 37104.4 |
| hypothetical protein | IM33_17365 | Not Available | - | 3681975 - 3685466 | 123598.0 |
| sortase | IM33_17370 | Q8Y588 | + | 3685715 - 3686287 | 23021.1 |
| dna methyltransferase | IM33_17390 | P05302 | - | 3688072 - 3689697 | 62786.4 |
| hypothetical protein | IM33_17395 | Not Available | + | 3690009 - 3692627 | 100826.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.