Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rpir family transcriptional regulator | IM33_16885 | Not Available | - | 3557461 - 3558186 | 28188.3 |
| cellobiose-phosphate degrading protein | IM33_16890 | Q928S6 | - | 3558455 - 3559219 | 29096.4 |
| pts acetylglucosamine transporter subunit iib | IM33_16895 | O34521 | - | 3559221 - 3560648 | 52272.6 |
| gntr family transcriptional regulator | IM33_16900 | O31459 | + | 3561034 - 3561756 | 27694.4 |
| beta-cystathionase | IM33_16905 | Not Available | - | 3561892 - 3563085 | 46844.1 |
| pts lactose transporter subunit iic | IM33_16910 | Not Available | - | 3563306 - 3564643 | 49361.5 |
| pts lactose transporter subunit iib | IM33_16915 | Not Available | - | 3564682 - 3565008 | 12114.1 |
| pts lactose transporter subunit iia | IM33_16920 | Not Available | - | 3565011 - 3565331 | 11883.2 |
| ethanolamine utilization protein | IM33_16925 | P77585 | - | 3565349 - 3566377 | 38307.4 |
| trehalose-6-phosphate hydrolase | IM33_16935 | P39795 | + | 3568738 - 3570405 | 66121.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.