Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rpir family transcriptional regulator | IM33_16835 | Not Available | - | 3543781 - 3544533 | 28510.6 |
| membrane protein | IM33_16840 | Not Available | - | 3544848 - 3545465 | 22352.8 |
| beta-glucosidase | IM33_16845 | Not Available | - | 3545553 - 3547001 | 56352.9 |
| pts lactose transporter subunit iia | IM33_16850 | Not Available | - | 3547014 - 3547376 | 13588.4 |
| pts cellobiose transporter subunit iic | IM33_16855 | P46317 | - | 3547405 - 3548637 | 45317.0 |
| pts lactose transporter subunit iib | IM33_16860 | O05505 | - | 3548660 - 3548977 | 11538.1 |
| transcriptional antiterminator | IM33_16865 | Not Available | + | 3549226 - 3551142 | 74870.2 |
| glycerate kinase | IM33_16870 | P23524 | - | 3551286 - 3552425 | 40465.9 |
| alpha-mannosidase | IM33_16875 | Not Available | - | 3552672 - 3555287 | 101058.0 |
| pts 2-o-a-mannosyl-d-glycerate transporter subunit iiabc | IM33_16880 | P54745 | - | 3555403 - 3557331 | 69308.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.