Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_16730 | Not Available | - | 3514981 - 3516027 | 38294.1 |
| 6-phospho-beta-glucosidase | IM33_16735 | Q46130 | - | 3516662 - 3518071 | 54482.6 |
| hypothetical protein | IM33_16740 | Not Available | - | 3518243 - 3520099 | 66232.2 |
| beta-glucosidase | IM33_16745 | Not Available | - | 3520570 - 3521832 | 48986.1 |
| laci family transcriptional regulator | IM33_16750 | Q9CN88 | - | 3521896 - 3522921 | 38434.2 |
| fucose isomerase | IM33_16755 | Not Available | - | 3523073 - 3524497 | 53212.3 |
| carbohydrate kinase | IM33_16760 | P18157 | - | 3524523 - 3526022 | 56035.0 |
| transketolase | IM33_16765 | A6KXB3 | - | 3526035 - 3526976 | 34263.2 |
| transketolase | IM33_16770 | A6KXB4 | - | 3526977 - 3527798 | 30654.0 |
| hypothetical protein | IM33_16775 | Q60313 | - | 3528378 - 3528899 | 20141.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.