Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | IM33_16665 | P29441 | - | 3499483 - 3500820 | 50613.4 |
| xylulose kinase | IM33_16670 | P39211 | - | 3500925 - 3502466 | 57148.5 |
| marr family transcriptional regulator | IM33_16675 | P16557 | + | 3502680 - 3503861 | 43526.8 |
| pts mannose transporter subunit iia | IM33_16680 | Not Available | - | 3504364 - 3504750 | 13758.6 |
| pts sugar transporter subunit iic | IM33_16685 | Not Available | - | 3504789 - 3505271 | 17703.7 |
| pts trehalose transporter subunit iibc | IM33_16690 | Not Available | - | 3505306 - 3506115 | 29364.6 |
| pts n-acetylgalactosamine transporter subunit iia | IM33_16695 | Not Available | - | 3506108 - 3506887 | 27790.6 |
| family 31 glucosidase | IM33_16700 | Q01336 | - | 3506887 - 3508965 | 80607.6 |
| hypothetical protein | IM33_16705 | Not Available | + | 3509276 - 3510145 | 34162.1 |
| alpha-glucosidase | IM33_16725 | P31434 | - | 3511999 - 3514353 | 90193.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.