Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phob family transcriptional regulator | IM33_16615 | Q6GJ11 | - | 3487858 - 3488535 | 26170.9 |
| abc transporter permease | IM33_16620 | Not Available | - | 3488687 - 3490594 | 71522.2 |
| bacitracin abc transporter atp-binding protein | IM33_16625 | Not Available | - | 3490595 - 3491347 | 27728.8 |
| mfs transporter | IM33_16630 | Not Available | - | 3491584 - 3492747 | 43022.7 |
| pts ascorbate transporter subunit iic | IM33_16635 | P45338 | - | 3492744 - 3493211 | 17460.3 |
| membrane protein | IM33_16640 | Not Available | - | 3493225 - 3493713 | 18617.6 |
| 6-phospho-alpha-glucosidase | IM33_16645 | O06901 | - | 3493727 - 3495058 | 50691.8 |
| pts alpha-glucoside transporter subunit iibc | IM33_16650 | Not Available | - | 3495072 - 3496637 | 57728.2 |
| rpir family transcriptional regulator | IM33_16655 | Not Available | - | 3496808 - 3497593 | 30558.3 |
| peptidase s41 | IM33_16660 | Not Available | - | 3497761 - 3498960 | 46194.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.