Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa reductase | IM33_16565 | Q97ML3 | - | 3476155 - 3477075 | 33636.6 |
| n-acetylmuramic acid-6-phosphate etherase | IM33_16570 | Q184N3 | - | 3477185 - 3478099 | 33021.2 |
| outer surface protein | IM33_16575 | Not Available | - | 3478198 - 3479295 | 42505.2 |
| pts lactose transporter subunit iic | IM33_16580 | Not Available | - | 3479528 - 3480874 | 48821.8 |
| pts cellobiose transporter subunit iib | IM33_16585 | Not Available | - | 3480964 - 3481272 | 11023.3 |
| membrane protein | IM33_16590 | Not Available | - | 3481536 - 3481934 | 15169.7 |
| anhydro-n-acetylmuramic acid kinase | IM33_16595 | Q184N9 | - | 3481936 - 3483096 | 42703.6 |
| peptide abc transporter atp-binding protein | IM33_16600 | Not Available | - | 3483518 - 3484183 | 24666.2 |
| hypothetical protein | IM33_16605 | Not Available | - | 3484208 - 3486775 | 98911.5 |
| histidine kinase | IM33_16610 | O35044 | - | 3486842 - 3487861 | 39410.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.