Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trmb family transcriptional regulator | IM33_16515 | Not Available | + | 3463142 - 3463894 | 28577.7 |
| diaminopimelate epimerase | IM33_16520 | O31570 | + | 3463881 - 3464762 | 32481.7 |
| major facilitator transporter | IM33_16525 | A8AJB3 | - | 3464978 - 3466333 | 49727.8 |
| card family transcriptional regulator | IM33_16530 | Not Available | - | 3468216 - 3468710 | 19013.0 |
| hypothetical protein | IM33_16535 | Not Available | - | 3468934 - 3470343 | 54866.4 |
| atpase aaa | IM33_16540 | Not Available | - | 3470347 - 3471477 | 43391.0 |
| hypothetical protein | IM33_16545 | Not Available | - | 3471489 - 3472292 | 30967.7 |
| proline iminopeptidase | IM33_16550 | Q184M8 | - | 3472673 - 3473554 | 33637.8 |
| membrane protein | IM33_16555 | Not Available | + | 3474018 - 3474992 | 37084.8 |
| rpir family transcriptional regulator | IM33_16560 | Q97MK5 | - | 3475287 - 3476138 | 31901.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.