Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxygluconate permease | IM33_16410 | Q8ZQZ4 | - | 3439860 - 3440834 | 33778.4 |
| iclr family transcriptional regulator | IM33_16415 | Not Available | + | 3441428 - 3442204 | 29008.0 |
| 1,2-propanediol oxidoreductase | IM33_16420 | F8DVL8 | + | 3442537 - 3443682 | 41105.7 |
| hypothetical protein | IM33_16425 | Not Available | - | 3443844 - 3444695 | 32603.4 |
| pyridine nucleotide-disulfide oxidoreductase | IM33_16430 | P77212 | - | 3445583 - 3446971 | 51372.3 |
| cytochrome c biogenesis protein ccsb | IM33_16435 | Q5KXL9 | - | 3447096 - 3448373 | 47735.9 |
| hxlr family transcriptional regulator | IM33_16440 | Not Available | - | 3448510 - 3448845 | 12946.1 |
| glycosyl hydrolase | IM33_16445 | P54746 | - | 3449386 - 3451986 | 99893.7 |
| pts mannose transporter subunit iiab | IM33_16450 | Not Available | - | 3452117 - 3453217 | 38152.6 |
| pts fructose transporter subunit iib | IM33_16455 | Not Available | - | 3453233 - 3453553 | 11488.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.