Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_16345 | Not Available | - | 3428099 - 3428314 | 8271.15 |
| fmn reductase | IM33_16355 | Not Available | - | 3429314 - 3429862 | 20076.0 |
| flavodoxin | IM33_16360 | Not Available | - | 3429875 - 3430420 | 19493.6 |
| iron abc transporter atpase | IM33_16375 | Q58283 | - | 3432309 - 3433505 | 44847.5 |
| iron abc transporter permease | IM33_16380 | Q0T4S1 | - | 3433508 - 3434533 | 37175.6 |
| iron abc transporter substrate-binding protein | IM33_16385 | Q58288 | - | 3434605 - 3435735 | 42168.2 |
| dihydrodipicolinate synthase | IM33_16390 | P75682 | - | 3436213 - 3437106 | 33750.7 |
| hydrolase | IM33_16395 | Not Available | - | 3437188 - 3438090 | 34034.4 |
| carbohydrate hydrolase | IM33_16400 | Q1QWP0 | - | 3438141 - 3439301 | 41669.8 |
| hydrolase | IM33_16405 | Not Available | - | 3439457 - 3439762 | 11271.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.