Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_16295 | P42422 | - | 3417055 - 3418059 | 39051.9 |
| transcriptional regulator | IM33_16300 | Not Available | - | 3418069 - 3418761 | 27189.9 |
| abc transporter substrate-binding protein | IM33_16305 | Not Available | - | 3419067 - 3420026 | 34601.6 |
| abc transporter atp-binding protein | IM33_16310 | Not Available | - | 3420059 - 3420937 | 33968.0 |
| abc transporter permease | IM33_16315 | Not Available | - | 3420930 - 3421712 | 28818.4 |
| hypothetical protein | IM33_16320 | Not Available | - | 3421713 - 3422342 | 24617.7 |
| hypothetical protein | IM33_16325 | Not Available | - | 3422721 - 3423347 | 24349.8 |
| ribonucleotide-diphosphate reductase | IM33_16330 | P50621 | - | 3423427 - 3424398 | 37364.3 |
| ribonucleotide-diphosphate reductase subunit alpha | IM33_16335 | P50620 | - | 3424411 - 3426510 | 79761.3 |
| hypothetical protein | IM33_16340 | Not Available | + | 3426989 - 3427714 | 27619.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.