Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein cas4 | IM33_16245 | Not Available | - | 3404808 - 3405326 | 20678.4 |
| crispr-associated protein cas3 | IM33_16250 | O27158 | - | 3405374 - 3407695 | 90066.4 |
| crispr-associated protein cas5 | IM33_16255 | Not Available | - | 3407706 - 3408407 | 27322.6 |
| crispr-associated protein devr | IM33_16260 | Not Available | - | 3408409 - 3409323 | 34850.7 |
| crispr-associated protein | IM33_16265 | Not Available | - | 3409325 - 3411193 | 73672.6 |
| crispr-associated protein cas6 | IM33_16270 | Not Available | - | 3411199 - 3411936 | 28988.3 |
| dna-binding protein | IM33_16275 | Not Available | - | 3412014 - 3412901 | 35033.0 |
| abc transporter permease | IM33_16280 | Not Available | - | 3413195 - 3415111 | 73911.7 |
| bacitracin abc transporter atp-binding protein | IM33_16285 | P42423 | - | 3415111 - 3415857 | 27615.7 |
| udp-diphosphatase | IM33_16290 | Q184H7 | - | 3415967 - 3416818 | 31138.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.