Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dipicolinate synthase subunit b | IM33_16190 | Q04810 | - | 3393819 - 3394409 | 21382.9 |
| dihydrofolate reductase | IM33_16195 | Q04809 | - | 3394412 - 3395287 | 31663.3 |
| amp-binding protein | IM33_16200 | O07619 | - | 3395363 - 3396754 | 53050.4 |
| thiolase | IM33_16205 | Q8CTR0 | - | 3396758 - 3397894 | 41458.2 |
| biotin biosynthesis protein bioy | IM33_16210 | Not Available | - | 3397914 - 3398459 | 19695.1 |
| hypothetical protein | IM33_16215 | Not Available | + | 3398754 - 3399533 | 30021.2 |
| methyltransferase type 11 | IM33_16220 | P42313 | - | 3399719 - 3400582 | 33392.6 |
| acetyltransferase | IM33_16225 | Not Available | - | 3400946 - 3401374 | 16800.1 |
| crispr-associated protein cas2 | IM33_16235 | B5YIU7 | - | 3403555 - 3403821 | 10403.5 |
| crispr-associated protein cas1 | IM33_16240 | Q0SUG8 | - | 3403825 - 3404805 | 39234.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.