Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit e | IM33_16140 | Q184F0 | - | 3380716 - 3381279 | 21179.4 |
| permease | IM33_16145 | P43457 | - | 3381331 - 3381822 | 16057.0 |
| atp synthase subunit i | IM33_16150 | Q57675 | - | 3381825 - 3383750 | 71897.5 |
| hypothetical protein | IM33_16155 | Not Available | - | 3383752 - 3384063 | 11281.7 |
| hypothetical protein | IM33_16160 | Not Available | - | 3384689 - 3384970 | 10881.9 |
| hypothetical protein | IM33_16165 | Not Available | - | 3385063 - 3386472 | 52513.4 |
| hypothetical protein | IM33_16170 | Not Available | - | 3386846 - 3387508 | 24894.9 |
| diguanylate phosphodiesterase | IM33_16175 | Not Available | - | 3387755 - 3389980 | 85312.3 |
| acetaldehyde dehydrogenase | IM33_16180 | P33744 | - | 3390256 - 3392910 | 96721.8 |
| hypothetical protein | IM33_16185 | Not Available | + | 3393412 - 3393612 | 7512.64 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.