Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter mate | IM33_16090 | Q65SY9 | - | 3368229 - 3369590 | 49704.7 |
| diguanylate cyclase | IM33_16095 | Q4L4H1 | + | 3370097 - 3371248 | 44001.1 |
| phosphonate abc transporter permease | IM33_16100 | Q57341 | - | 3371338 - 3373056 | 63532.8 |
| phosphonate abc transporter atp-binding protein | IM33_16105 | Q9X196 | - | 3373061 - 3374050 | 37226.2 |
| iron abc transporter substrate-binding protein | IM33_16110 | Not Available | - | 3374146 - 3375195 | 38862.4 |
| atp synthase subunit d | IM33_16115 | Q184E4 | - | 3375475 - 3376143 | 25512.3 |
| atp synthase subunit b | IM33_16120 | Q184E3 | - | 3376149 - 3377522 | 50562.9 |
| atp synthase subunit a | IM33_16125 | Q184E7 | - | 3377519 - 3379297 | 65526.6 |
| atp synthase subunit f | IM33_16130 | B2UWY5 | - | 3379414 - 3379737 | 11760.5 |
| atp synthase subunit c | IM33_16135 | Not Available | - | 3379724 - 3380701 | 37249.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.