Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | IM33_16040 | P49937 | - | 3359156 - 3360178 | 36841.7 |
| ferrichrome abc transporter permease | IM33_16045 | P49936 | - | 3360184 - 3361197 | 35741.6 |
| ferrichrome abc transporter substrate-binding protein | IM33_16050 | Not Available | - | 3361326 - 3362264 | 34799.0 |
| hypothetical protein | IM33_16055 | Not Available | + | 3362536 - 3363000 | 17731.5 |
| hypothetical protein | IM33_16060 | Not Available | - | 3363112 - 3363429 | 11799.1 |
| cellobiose-phosphate degrading protein | IM33_16065 | Q9XBH4 | - | 3363442 - 3364173 | 27808.7 |
| diacetylchitobiose-6-phosphate hydrolase | IM33_16070 | P46320 | - | 3364196 - 3365506 | 49005.2 |
| pts cellobiose transporter subunit iic | IM33_16075 | Not Available | - | 3365583 - 3366896 | 46619.8 |
| pts mannose transporter subunit iib | IM33_16080 | Not Available | - | 3366918 - 3367226 | 11193.8 |
| gntr family transcriptional regulator | IM33_16085 | P13669 | - | 3367430 - 3368134 | 26839.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.