Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacterioferritin | IM33_15990 | Not Available | - | 3346013 - 3346546 | 20620.6 |
| peptidase u62 | IM33_15995 | P0AFK1 | - | 3346605 - 3347954 | 49143.5 |
| peptidase c69 | IM33_16000 | P0AGG9 | - | 3347966 - 3349348 | 49684.1 |
| fis family transcriptional regulator | IM33_16005 | Not Available | + | 3349683 - 3351575 | 72371.0 |
| 2-keto-3-deoxygluconate permease | IM33_16010 | Not Available | + | 3351845 - 3352819 | 33271.9 |
| altronate hydrolase | IM33_16015 | Not Available | + | 3352840 - 3353115 | 10071.1 |
| carbohydrate hydrolase | IM33_16020 | Not Available | + | 3353128 - 3354291 | 40792.1 |
| diguanylate phosphodiesterase | IM33_16025 | Q9HYT3 | + | 3354634 - 3356916 | 87308.0 |
| multidrug transporter mate | IM33_16030 | Q6GCD7 | - | 3357007 - 3358347 | 49425.9 |
| iron-dicitrate transporter atp-binding subunit | IM33_16035 | P49938 | - | 3358359 - 3359141 | 28815.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.