Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methenyltetrahydromethanopterin cyclohydrolase | IM33_15935 | A6UPJ2 | - | 3331291 - 3332250 | 35157.2 |
| hypothetical protein | IM33_15945 | O32144 | - | 3332540 - 3334792 | 82408.7 |
| xanthine dehydrogenase | IM33_15950 | Not Available | - | 3334785 - 3335264 | 17184.4 |
| uracil-xanthine permease | IM33_15955 | P50487 | - | 3335646 - 3336971 | 46104.8 |
| d-aminoacylase | IM33_15960 | P94212 | - | 3338068 - 3339669 | 59799.1 |
| membrane protein | IM33_15965 | Not Available | - | 3339774 - 3340451 | 23792.1 |
| membrane protein | IM33_15970 | Not Available | - | 3340464 - 3341159 | 24828.5 |
| diguanylate cyclase | IM33_15975 | Q9H4A9 | - | 3341211 - 3342410 | 44973.0 |
| fis family transcriptional regulator | IM33_15980 | P54529 | - | 3342672 - 3344717 | 78528.9 |
| alpha/beta hydrolase | IM33_15985 | O06734 | - | 3345120 - 3345929 | 30248.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.