Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | IM33_15785 | P54955 | - | 3296540 - 3297724 | 43346.6 |
| membrane protein | IM33_15790 | P37520 | - | 3297963 - 3299051 | 39230.4 |
| chemotaxis protein chey | IM33_15795 | P52931 | - | 3299328 - 3300032 | 27183.1 |
| histidine kinase | IM33_15800 | Not Available | - | 3300146 - 3301651 | 58328.0 |
| seryl-trna synthetase | IM33_15805 | A8MEB3 | - | 3301843 - 3303114 | 48473.1 |
| amidohydrolase | IM33_15810 | Not Available | - | 3303813 - 3305417 | 60482.5 |
| nitrilase | IM33_15815 | G9AIU0 | + | 3305803 - 3306729 | 34401.4 |
| quinone oxidoreductase | IM33_15820 | O07615 | - | 3306911 - 3307909 | 36127.3 |
| marr family transcriptional regulator | IM33_15825 | Not Available | + | 3308013 - 3308450 | 16749.4 |
| hypothetical protein | IM33_15830 | Not Available | + | 3308536 - 3309123 | 22374.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.