Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_15735 | Q183R7 | - | 3280389 - 3281051 | 24230.0 |
| collagen-binding protein | IM33_15740 | Not Available | - | 3281422 - 3284328 | 107191.0 |
| cation diffusion facilitator family transporter | IM33_15745 | Not Available | - | 3284653 - 3285831 | 43669.0 |
| membrane protein | IM33_15750 | Not Available | - | 3285964 - 3286902 | 33494.7 |
| atpase aaa | IM33_15755 | Q01265 | + | 3287238 - 3288611 | 52031.7 |
| lysr family transcriptional regulator | IM33_15760 | A0A0H2ZDG9 | - | 3289010 - 3289876 | 33349.8 |
| prolyl-trna synthetase | IM33_15765 | Not Available | + | 3290003 - 3290542 | 20521.9 |
| calcium abc transporter atpase | IM33_15770 | Not Available | - | 3290662 - 3293436 | 101932.0 |
| serine hydroxymethyltransferase | IM33_15775 | B8E008 | - | 3293612 - 3294868 | 45851.9 |
| aminobenzoyl-glutamate transporter | IM33_15780 | Not Available | - | 3294940 - 3296490 | 55223.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.