Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid racemase | IM33_15685 | Not Available | + | 3269712 - 3270824 | 40172.4 |
| nucleoside recognition protein | IM33_15690 | P0AEI0 | - | 3271114 - 3271623 | 17790.9 |
| hypothetical protein | IM33_15695 | P39379 | - | 3271625 - 3272272 | 22784.2 |
| peptidase m20 | IM33_15700 | Not Available | - | 3272286 - 3273458 | 43434.0 |
| hypothetical protein | IM33_15705 | Not Available | + | 3273725 - 3275101 | 53048.5 |
| flavodoxin | IM33_15710 | Not Available | - | 3275386 - 3275919 | 19849.7 |
| oxidoreductase | IM33_15715 | P32382 | - | 3276010 - 3277104 | 40728.3 |
| marr family transcriptional regulator | IM33_15720 | Not Available | - | 3277106 - 3277552 | 17597.9 |
| aspartate aminotransferase | IM33_15725 | O07587 | + | 3277857 - 3279047 | 44431.0 |
| membrane protein | IM33_15730 | P38943 | + | 3279215 - 3280180 | 35966.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.