Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell wall-binding protein | IM33_15575 | Not Available | - | 3247759 - 3249654 | 68546.1 |
| membrane protein | IM33_15585 | Not Available | - | 3250177 - 3250539 | 13047.5 |
| preprotein translocase subunit yajc | IM33_15590 | O51595 | - | 3250597 - 3250890 | 10956.8 |
| queuine trna-ribosyltransferase | IM33_15595 | A3DE13 | - | 3251024 - 3252145 | 42316.4 |
| membrane protein | IM33_15600 | Not Available | - | 3252220 - 3252705 | 18027.7 |
| s-adenosylmethionine trna ribosyltransferase | IM33_15605 | Q183N9 | - | 3252717 - 3253742 | 38455.4 |
| atp-dependent dna helicase ruvb | IM33_15610 | Q183N8 | - | 3254060 - 3255079 | 37733.6 |
| atp-dependent dna helicase ruva | IM33_15615 | A8MHI4 | - | 3255171 - 3255773 | 22081.0 |
| holliday junction resolvase | IM33_15620 | Q183P3 | - | 3255766 - 3256275 | 18501.7 |
| hypothetical protein | IM33_15625 | Not Available | - | 3256591 - 3257220 | 23664.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.