Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | IM33_01270 | Not Available | + | 220779 - 222164 | 51253.2 |
| hypothetical protein | IM33_01275 | Not Available | - | 222500 - 223144 | 23929.4 |
| tetr family transcriptional regulator | IM33_01280 | Not Available | + | 223421 - 224035 | 23937.1 |
| hypothetical protein | IM33_01295 | Not Available | + | 225384 - 226223 | 32955.8 |
| hypothetical protein | IM33_01300 | Not Available | + | 226213 - 226653 | 17193.9 |
| membrane protein | IM33_01305 | Not Available | + | 226664 - 227161 | 18903.0 |
| haloacid dehalogenase | IM33_01310 | Not Available | - | 227268 - 227996 | 28066.4 |
| hypothetical protein | IM33_01315 | Not Available | + | 228124 - 229212 | 42584.0 |
| hypothetical protein | IM33_01320 | Not Available | - | 229410 - 229670 | 9955.17 |
| hypothetical protein | IM33_01325 | Not Available | - | 230085 - 230963 | 32429.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.