Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell wall hydrolase | IM33_15470 | P76190 | - | 3221101 - 3221808 | 25035.1 |
| nucleoside-diphosphate sugar epimerase | IM33_15475 | P39853 | - | 3222007 - 3223920 | 72302.0 |
| capsular biosynthesis protein | IM33_15480 | Q81ST7 | - | 3224004 - 3225095 | 41419.7 |
| udp-glucose 6-dehydrogenase | IM33_15485 | P96718 | - | 3225101 - 3226396 | 48137.8 |
| glycosyl transferase | IM33_15490 | Not Available | - | 3226423 - 3227175 | 28878.8 |
| beta-glycosyltransferase | IM33_15495 | Not Available | - | 3227223 - 3228131 | 35294.3 |
| glycosyl transferase | IM33_15500 | O32268 | - | 3228153 - 3228902 | 28792.9 |
| glycerophosphotransferase | IM33_15505 | P46918 | - | 3228931 - 3230106 | 46381.5 |
| glycosyl transferase | IM33_15510 | Not Available | - | 3230121 - 3230960 | 32374.8 |
| polysaccharide polymerase | IM33_15515 | Not Available | - | 3230963 - 3232120 | 44681.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.