Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospholipase | IM33_15415 | Not Available | - | 3207372 - 3208583 | 46762.4 |
| sam-dependent methyltransferase | IM33_15420 | P43422 | - | 3208815 - 3210548 | 68685.6 |
| rrf2 family transcriptional regulator | IM33_15425 | Not Available | - | 3210588 - 3210986 | 15309.7 |
| diguanylate phosphodiesterase | IM33_15430 | Q9I310 | - | 3210989 - 3212536 | 59400.1 |
| dihydroorotate dehydrogenase | IM33_15440 | Q8RA26 | - | 3213745 - 3214389 | 24440.8 |
| hypothetical protein | IM33_15445 | Not Available | + | 3214528 - 3214998 | 17619.1 |
| had family hydrolase | IM33_15450 | P75792 | - | 3215120 - 3215908 | 30055.3 |
| lytr family transcriptional regulator | IM33_15455 | Q7WY78 | + | 3216277 - 3217233 | 36094.1 |
| lytr family transcriptional regulator | IM33_15460 | Q815A2 | + | 3217522 - 3218487 | 36436.6 |
| cell surface protein | IM33_15465 | O35015 | - | 3218685 - 3220796 | 77725.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.