Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_15315 | Not Available | + | 3182294 - 3182563 | 10126.3 |
| cell surface protein | IM33_15320 | Not Available | - | 3182644 - 3184071 | 51412.0 |
| lysr family transcriptional regulator | IM33_15325 | P37499 | + | 3184463 - 3185332 | 33186.2 |
| aspartyl-trna synthetase | IM33_15330 | B8I3F1 | - | 3185464 - 3187251 | 67515.9 |
| histidyl-trna synthetase | IM33_15335 | Q183H5 | - | 3187325 - 3188587 | 47783.2 |
| coproporphyrinogen iii oxidase | IM33_15340 | Q796V8 | - | 3188577 - 3190136 | 61049.8 |
| hydrolase | IM33_15345 | Q49649 | - | 3190226 - 3190840 | 22898.3 |
| d-tyrosyl-trna(tyr) deacylase | IM33_15350 | Q183H9 | - | 3190855 - 3191304 | 16471.8 |
| (p)ppgpp synthetase | IM33_15355 | O54408 | - | 3191329 - 3193536 | 84562.3 |
| adenine phosphoribosyltransferase | IM33_15360 | Q183I0 | - | 3193610 - 3194122 | 18724.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.