Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-udp n-acetylglucosamine transferase | IM33_15265 | Q8CPR3 | - | 3171617 - 3172714 | 42053.8 |
| serine hydroxymethyltransferase | IM33_15270 | Q183G0 | - | 3172955 - 3174199 | 45766.1 |
| membrane protein | IM33_15275 | Not Available | + | 3174527 - 3175315 | 28981.8 |
| membrane protein | IM33_15280 | Not Available | + | 3175315 - 3175788 | 16919.4 |
| regulator | IM33_15285 | Not Available | - | 3175880 - 3176320 | 15903.8 |
| hypothetical protein | IM33_15290 | O32222 | - | 3176335 - 3176628 | 11207.7 |
| membrane protein | IM33_15295 | Not Available | - | 3176675 - 3177076 | 15178.1 |
| atpase aaa | IM33_15300 | Not Available | + | 3177311 - 3179431 | 81466.3 |
| cystathionine beta-lyase | IM33_15305 | Q08432 | + | 3179658 - 3180824 | 44813.8 |
| sodium:proton antiporter | IM33_15310 | P54571 | + | 3180849 - 3182291 | 52183.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.