Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | IM33_15210 | Q18CI8 | + | 3162996 - 3163337 | 12966.1 |
| cobalt transporter atp-binding subunit | IM33_15215 | Q18CJ0 | + | 3163457 - 3164290 | 30980.0 |
| cobalt transporter atp-binding subunit | IM33_15220 | Q18CI9 | + | 3164278 - 3165144 | 32153.0 |
| transporter | IM33_15225 | A5N4S9 | + | 3165138 - 3165941 | 30339.7 |
| pseudouridine synthase | IM33_15230 | A3DJK8 | + | 3165974 - 3166705 | 27269.9 |
| 50s ribosomal protein l13 | IM33_15235 | Q18CJ1 | + | 3166825 - 3167256 | 16203.8 |
| 30s ribosomal protein s9 | IM33_15240 | Q18CJ5 | + | 3167285 - 3167677 | 14553.7 |
| n-acetylmuramoyl-l-alanine amidase | IM33_15245 | P50864 | + | 3168139 - 3168891 | 28756.6 |
| membrane protein | IM33_15255 | Not Available | - | 3169861 - 3170925 | 39070.7 |
| polysaccharide deacetylase | IM33_15260 | Q81EK9 | - | 3170928 - 3171626 | 26715.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.