Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit secy | IM33_15160 | P43416 | + | 3156958 - 3158226 | 46213.1 |
| adenylate kinase | IM33_15165 | Q18CH9 | + | 3158243 - 3158893 | 23671.5 |
| methionine aminopeptidase | IM33_15170 | Q9Z9J4 | + | 3158894 - 3159640 | 27290.8 |
| hypothetical protein | IM33_15175 | Not Available | + | 3159653 - 3159931 | 10586.2 |
| translation initiation factor if-1 | IM33_15180 | Q18CI2 | + | 3159969 - 3160187 | 8282.25 |
| 50s ribosomal protein l36 | IM33_15185 | Q97EK2 | + | 3160223 - 3160336 | 4277.6 |
| 30s ribosomal protein s13 | IM33_15190 | Q18CI0 | + | 3160489 - 3160860 | 14093.3 |
| 30s ribosomal protein s11 | IM33_15195 | Q18CI7 | + | 3160896 - 3161294 | 14438.6 |
| 30s ribosomal protein s4 | IM33_15200 | Q18CI6 | + | 3161327 - 3161950 | 23567.7 |
| dna-directed rna polymerase subunit alpha | IM33_15205 | Q18CI5 | + | 3162028 - 3162975 | 34938.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.