Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 | IM33_15060 | Q18CG0 | + | 3147899 - 3148528 | 22344.5 |
| 50s ribosomal protein l4 | IM33_15065 | A8MLE1 | + | 3148558 - 3149181 | 22717.5 |
| 50s ribosomal protein l23 | IM33_15070 | Q18CF8 | + | 3149181 - 3149471 | 10795.2 |
| 50s ribosomal protein l2 | IM33_15075 | Q18CG3 | + | 3149501 - 3150331 | 29883.8 |
| 30s ribosomal protein s19 | IM33_15080 | Q18CG2 | + | 3150366 - 3150647 | 10606.8 |
| 50s ribosomal protein l22 | IM33_15085 | Q18CG1 | + | 3150679 - 3151014 | 12252.2 |
| 30s ribosomal protein s3 | IM33_15090 | Q18CG5 | + | 3151037 - 3151852 | 30405.5 |
| 50s ribosomal protein l16 | IM33_15095 | Q18CG4 | + | 3151888 - 3152319 | 16057.0 |
| 50s ribosomal protein l29 | IM33_15100 | Q18CG9 | + | 3152321 - 3152524 | 7848.64 |
| 30s ribosomal protein s17 | IM33_15105 | Q18CG8 | + | 3152548 - 3152802 | 10063.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.