Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s ferredoxin | IM33_01220 | Not Available | + | 210107 - 211180 | 39096.8 |
| hypothetical protein | IM33_01225 | Not Available | + | 211250 - 211513 | 10466.6 |
| biotin synthase | IM33_01230 | Q18D35 | + | 211721 - 212698 | 36638.2 |
| laci family transcriptional regulator | IM33_01235 | A7N1L2 | + | 212926 - 213939 | 38048.8 |
| ribokinase | IM33_01240 | P36945 | + | 213981 - 214883 | 32772.3 |
| sugar abc transporter substrate-binding protein | IM33_01245 | P36949 | + | 214923 - 215885 | 34495.5 |
| d-ribose transporter atp-binding protein | IM33_01250 | Not Available | + | 215939 - 217450 | 56486.0 |
| ribose abc transporter permease | IM33_01255 | Not Available | + | 217434 - 218432 | 34353.4 |
| acetylornithine deacetylase | IM33_01260 | O34984 | + | 218581 - 219843 | 46511.1 |
| hypothetical protein | IM33_01265 | Not Available | + | 219863 - 220606 | 27659.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.