Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | IM33_14950 | Q8RAE8 | - | 3122305 - 3123099 | 30565.4 |
| mfs transporter | IM33_14955 | O34597 | - | 3123163 - 3124380 | 43836.1 |
| shikimate dehydrogenase | IM33_14960 | Q723F9 | - | 3124577 - 3125440 | 31613.2 |
| nadh oxidase | IM33_14965 | Not Available | - | 3125522 - 3127444 | 68946.0 |
| ap endonuclease | IM33_14970 | Not Available | - | 3127523 - 3128371 | 31709.8 |
| lysr family transcriptional regulator | IM33_14975 | Not Available | + | 3128790 - 3129671 | 33603.1 |
| amidohydrolase | IM33_14980 | Not Available | - | 3129975 - 3130784 | 31207.3 |
| cell wall protein | IM33_14985 | O34816 | - | 3130993 - 3132954 | 72085.8 |
| udp-galactose-4-epimerase | IM33_14990 | P55180 | - | 3133039 - 3134052 | 37500.9 |
| utp--glucose-1-phosphate uridylyltransferase | IM33_14995 | Q05852 | - | 3134076 - 3134951 | 32975.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.