Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | IM33_14900 | P54983 | - | 3108381 - 3109502 | 40910.4 |
| hypothetical protein | IM33_14905 | Not Available | - | 3109563 - 3110048 | 17039.6 |
| hypothetical protein | IM33_14910 | Not Available | - | 3110050 - 3110718 | 23682.2 |
| atpase aaa | IM33_14915 | Not Available | + | 3111100 - 3113127 | 77562.0 |
| hypothetical protein | IM33_14920 | Not Available | - | 3113281 - 3114468 | 44650.0 |
| branched-chain amino acid transporter | IM33_14925 | O34545 | - | 3114671 - 3115954 | 44900.6 |
| hypothetical protein | IM33_14930 | Not Available | - | 3116083 - 3116736 | 24775.7 |
| guanine permease | IM33_14935 | Q57772 | + | 3117239 - 3118582 | 46990.9 |
| amidohydrolase | IM33_14940 | A5UMN6 | + | 3118737 - 3120101 | 50626.5 |
| restriction endonuclease | IM33_14945 | Not Available | - | 3120235 - 3122100 | 73849.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.