Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | IM33_14745 | Q51872 | + | 3074257 - 3075126 | 34095.1 |
| peptide abc transporter substrate-binding protein | IM33_14750 | P42065 | - | 3075279 - 3076250 | 36391.7 |
| peptide abc transporter atpase | IM33_14755 | P42064 | - | 3076251 - 3077228 | 36247.8 |
| peptide abc transporter substrate-binding protein | IM33_14760 | P42061 | + | 3077447 - 3079006 | 58116.8 |
| peptide permease | IM33_14765 | P42062 | + | 3079112 - 3080071 | 35039.2 |
| peptide abc transporter permease | IM33_14770 | P42063 | + | 3080074 - 3080886 | 29788.4 |
| lysr family transcriptional regulator | IM33_14775 | P44876 | - | 3081102 - 3082004 | 34973.3 |
| acetyl-coa acetyltransferase | IM33_14780 | Not Available | + | 3082356 - 3083534 | 41383.4 |
| branched-chain amino acid dehydrogenase | IM33_14785 | P76458 | + | 3083543 - 3084199 | 23406.2 |
| acetate coa-transferase | IM33_14790 | P23673 | + | 3084199 - 3084864 | 23007.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.