Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsz | IM33_14635 | Q9K9T7 | - | 3049181 - 3050338 | 40808.2 |
| hypothetical protein | IM33_14640 | P28265 | - | 3050528 - 3050881 | 13209.5 |
| hypothetical protein | IM33_14645 | Not Available | - | 3050980 - 3051654 | 24754.8 |
| hypothetical protein | IM33_14650 | Not Available | - | 3051659 - 3052357 | 26316.6 |
| cell division protein ftsq | IM33_14655 | Q894C1 | - | 3052380 - 3053120 | 28703.2 |
| udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | IM33_14660 | Q182Y6 | - | 3053392 - 3054618 | 44828.7 |
| stage v sporulation protein e | IM33_14665 | P07373 | - | 3054636 - 3055766 | 40687.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetase | IM33_14670 | Q182Y7 | - | 3055818 - 3057173 | 50052.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | IM33_14675 | Q182Y8 | - | 3057192 - 3058160 | 34928.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | IM33_14680 | P96613 | - | 3058201 - 3059574 | 51047.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.