Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_14585 | P50742 | - | 3040228 - 3041160 | 34522.3 |
| histidine kinase | IM33_14590 | Not Available | - | 3041215 - 3042504 | 49099.8 |
| arsr family transcriptional regulator | IM33_14595 | Not Available | - | 3042532 - 3043224 | 26742.5 |
| toxin | IM33_14600 | Q8IV20 | - | 3043239 - 3043997 | 28569.4 |
| nrdr family transcriptional regulator | IM33_14605 | Q182X3 | - | 3043997 - 3044458 | 18305.2 |
| ylmc/ymxh family sporulation protein | IM33_14610 | O31725 | - | 3044480 - 3044743 | 9860.91 |
| sporulation sigma factor sigg | IM33_14615 | P33658 | - | 3044847 - 3045620 | 29615.9 |
| sporulation sigma factor sige | IM33_14620 | P62177 | - | 3045712 - 3046434 | 27709.4 |
| peptidase | IM33_14625 | Not Available | - | 3046459 - 3047331 | 32813.7 |
| sugar abc transporter substrate-binding protein | IM33_14630 | Not Available | - | 3047629 - 3048903 | 47695.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.