Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_14425 | Not Available | + | 3005800 - 3006129 | 12694.6 |
| hypothetical protein | IM33_14430 | O34870 | + | 3006214 - 3006645 | 16228.4 |
| tryptophanyl-trna synthetase | IM33_14435 | Q97LD6 | - | 3007699 - 3008700 | 37922.6 |
| s-adenosylhomocysteine nucleosidase | IM33_14440 | B9DNJ2 | - | 3008725 - 3009423 | 25116.4 |
| amino acid permease | IM33_14445 | P37034 | - | 3009797 - 3011200 | 50735.5 |
| proline dipeptidase | IM33_14450 | Q49YD7 | + | 3011694 - 3012770 | 39852.9 |
| 6-phosphogluconate dehydratase | IM33_14455 | Q97L61 | - | 3012875 - 3013717 | 30764.4 |
| tetr family transcriptional regulator | IM33_14460 | Not Available | + | 3013901 - 3014437 | 20087.2 |
| membrane protein | IM33_14475 | P54478 | - | 3015342 - 3016214 | 32208.4 |
| isoleucyl-trna synthase | IM33_14480 | A0Q3B0 | - | 3016511 - 3019618 | 119841.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.