Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uracil transporter | IM33_14365 | P45117 | - | 2995709 - 2996917 | 42205.3 |
| bifunctional pyrimidine regulatory protein pyrr uracil phosphoribosyltransferase | IM33_14370 | Q182T5 | - | 2997192 - 2997725 | 19752.9 |
| pseudouridine synthase | IM33_14375 | Not Available | - | 2998087 - 2999034 | 36483.5 |
| lipoprotein signal peptidase | IM33_14380 | Q182T8 | - | 2999003 - 2999449 | 16920.3 |
| oligosaccharide deacetylase | IM33_14385 | Not Available | - | 2999769 - 3000548 | 29663.5 |
| transcriptional regulator | IM33_14390 | Not Available | - | 3000598 - 3001080 | 18302.2 |
| lyttr family transcriptional regulator | IM33_14400 | P0AE40 | - | 3002193 - 3002879 | 26999.6 |
| xre family transcriptional regulator | IM33_14410 | Not Available | + | 3003562 - 3003813 | 9367.7 |
| marr family transcriptional regulator | IM33_14415 | Not Available | + | 3004028 - 3004462 | 16909.6 |
| multidrug transporter mate | IM33_14420 | Not Available | + | 3004455 - 3005786 | 48280.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.