Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | IM33_14315 | A6TRW8 | - | 2983127 - 2983567 | 16290.8 |
| dead/deah box helicase | IM33_14320 | P94461 | - | 2983585 - 2986074 | 95324.4 |
| phosphopantothenoylcysteine decarboxylase | IM33_14325 | O35033 | - | 2986322 - 2987521 | 43748.1 |
| dna-directed rna polymerase subunit omega | IM33_14330 | Q182S6 | - | 2987526 - 2987792 | 10168.0 |
| guanylate kinase | IM33_14335 | Q182S8 | - | 2987795 - 2988412 | 23371.4 |
| hypothetical protein | IM33_14340 | O34441 | - | 2988442 - 2989323 | 34248.0 |
| diaminopimelate epimerase | IM33_14345 | A6TRX5 | - | 2989327 - 2990157 | 30693.1 |
| threonine aldolase | IM33_14350 | Q8RXU4 | - | 2990447 - 2991481 | 38048.2 |
| fibronectin-binding protein | IM33_14355 | D4FWG0 | + | 2991776 - 2993551 | 67813.7 |
| abc transporter | IM33_14360 | O05519 | - | 2993766 - 2995418 | 63269.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.